You want your pulley set screws very very tight. So tight you think you might almost break something. Make sure all 5 pulley set screws are tight. The 5th one is the most likely problem one - on the motor. Daid's idea of using a sharpie marker is very smart.
You could also consider lowering your jerk and acceleration values, but it would be a shame to do that to fix a simple mechanical problem.
There's a tiny probability that the voltage to your X stepper is too low. I really doubt this is it. The safest and simplest test would be to swap the X and Y drivers (they just unplug and you can switch them). If you do this, make sure power is off and remove all static electricity from your body before touching any electronics by not wearing a sweater and touching ground first.
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Daid 304
While you say you have already checked this, the most usual cause is a slightly lose pulley somewhere on the X axis. I recommend using a marker to put some dots on the axis and pulleys, this way you can see if they shift.
I think your kit already came with some spare pulley screws in case one of them is bad. If you identify the lose pulley you might want to replace the pulley screw with a new one, some are badly machined and are better off replaced.
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