You are right!
I checked that by adding another 0.1mm (1 layer) to my "bottom raft". This resulted in 2 "wrong" covering layers.
Adding another 0.1mm resulted in 3 "wrong" covering layers.
So it's exactly how you described it.
I can't really think of any actual models where this could be an issue, except mine which is really unusual. It could affect vertical engravings, but only if they go deeper than the wall thickness. Other than that, I don't see where else this could occur.
If you were to check every layer instead of just the one "X layers below", it would probably need much more time to slice models. Probably not worth making everything worse just to get one very rare bug fixed...
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Daid 306
I'm not 100% sure if I understand it correctly. But I do think I know the cause.
What the Cura code does is when it need to check if somewhere needs solid infill it looks down X (usually 6) layers, and checks if there is a solid or open space there. If it's open, then it needs solid infill, else sparse infill. In this case, the filled bottom layer causes the higher layer at layer 13 to be "empty".
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