Cura checks if the start gcode contains commands to heat up the hotend and bed before the print is started. If the start gcode does not have command to do that, CuraEngine adds the three lines (M190, M104, M109) before your start gcode just to make sure that the hotend is not cold before starting the actual print.   If you don't want Cura to add these lines, make sure your start gcode contains lines which have {material_print_temperature_layer_0} and {material_bed_temperature_layer_0}
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