I decided to test the print and watch it closely to see if it encountered any problems. I had to cancel it after less than 10 minutes. On the right side, the fans were bumping into the wall. On the front side, the extruder hit the endblock. The attached photos show what happened to the print as a result.
There was extra space on the opposite sides (left and back) though so it seems that the extruder is slightly off center. I tried homing the extruder but I printed again and got the same result. I have not tried bending the trigger switches yet, but based on the photos, do you think it could make enough of a difference that the print would work? Also, do you have any other suggestions for what could fix this? I have access to 3 other Ultimaker 2 extended printers so if every UM2 is different, do you think it might work on one of those?