I tried your suggestion of setting just the support roof to extruder 2. It did what it was supposed to do (sort of), But still did not give the nice clean separation between the filaments. I think because its still doing the zig-zag support for extruder 1, and that filament is still too close to the non-support material.
So, I went back to my model and made some modifications so that I could print it upside down with only minimal PVA support where it was touching the bed. Basically that gave me what I needed. Sometimes you just have to flip things upside down.
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Smithy 1,146
It is possible, you have to enable the Support Roof. The Support Roof option makes a more intense structure below the surface of your model and results in a nicer flatter surface, but harder to remove.
But, you can set the Extruder which should print the Support Roof, so when you print your model with extruder 1 and support also with extruder 1, then set the extruder for the support roof to extruder 2 and you get exactly what you want.
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