Sources are at https://github.com/Ultimaker/Marlin
As Illuminarti said, this update was mostly to get in line and get all the updates from the last year that where done on Marlin. (We did change the Controller-Beep back to the older one)
Cura works on just about any firmware. So no problems there.
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illuminarti 18
No, Cura versions are generally not tied to any particular release of the firmware - especially for the UM1. The new version in Cura is just updating to something closer to the current head of the Erik van der Zalm master repository, which is what the builder website is using anyway. So you can keep using the custom version without issues.
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