Unless you want to source everything yourself (its definitely possible, others have done so...) I´m pretty sure you have to just buy the kit and throw away (or sell them as spares?) the wooden panels in favor of your own laser cut from whatever material you like (what were you thinking of building it from?).
Alternatively, if its only the wooden look you are not too happy about, you can paint the wooden laser cut parts before assembly...
I just recently took mine apart and spray painted it a glossy white, now it looks like this:
Others have used water based colors to simply dye the wood in a color...
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IRobertI 521
You can find all of the design files here:
https://github.com/Ultimaker/UltimakerOriginal
As for purchasing just the parts, not sure.
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